Tool

NeoAntigens Prediction@CNB (NAP-CNB) is a tool for the prediction of neoantigenic peptides from RNA-seq or protein data. It provides a list of putative neoantigens along with some predictions associated with each sequence. NAP-CNB uses variant calling methods for the identification of mutations in the samples. It also uses neural networks to predict on the mutant peptides in order to output a list of putative neoantigens. It allows to analyze protein sequences and RNA-seq sequences obtained by next generation sequencing methods.