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BCB Services: Cellular, Molecular and Bioinformatics Service at ICVV
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Publications
Tello, J., Carbonell-Bejerano, P., Torres-Pérez, R., Ferradás, Y., Royo, C., Portu, J., Cibriáin, J. F., Oliveros, J. C., Ibáñez, J., & Martínez-Zapater, J. M. (2025). Genome resequencing and custom genotyping elucidates the origin and dissemination history of an emblematic grapevine cultivar, ‘Tempranillo Tinto.’ Horticulture Research, 12(12). https://doi.org/10.1093/hr/uhaf237
de la Mata, R., Mollá-Morales, A., Méndez-Vigo, B., Torres-Pérez, R., Oliveros, J. C., Gómez, R., Marcer, A., Castilla, A. R., Nordborg, M., Alonso-Blanco, C., & Picó, F. X. (2024). Variation and plasticity in life-history traits and fitness of wild Arabidopsis thaliana populations are not related to their genotypic and ecological diversity. BMC Ecology and Evolution, 24(1). https://doi.org/10.1186/s12862-024-02246-x
Fuster-Pons, A., Murillo-Sánchez, A., Méndez-Vigo, B., Marcer, A., Pieper, B., Torres-Pérez, R., Oliveros, J. C., Tsiantis, M., Picó, F. X., & Alonso-Blanco, C. (2024). The trichome pattern diversity of Cardamine shares genetic mechanisms with Arabidopsis but differs in environmental drivers. Plant Physiology, 196(4), 2730–2748. https://doi.org/10.1093/plphys/kiae213
Calsina, B., Piñeiro-Yáñez, E., Martínez-Montes, Á. M., Caleiras, E., Fernández-Sanromán, Á., Monteagudo, M., Torres-Pérez, R., Fustero-Torre, C., Pulgarín-Alfaro, M., Gil, E., Letón, R., Jiménez, S., García-Martín, S., Martin, M. C., Roldán-Romero, J. M., Lanillos, J., Mellid, S., Santos, M., Díaz-Talavera, A., … Robledo, M. (2023). Genomic and immune landscape Of metastatic pheochromocytoma and paraganglioma. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-36769-6
Nicolas, M., Torres-Pérez, R., Wahl, V., Cruz-Oró, E., Rodríguez-Buey, M. L., Zamarreño, A. M., Martín-Jouve, B., García-Mina, J. M., Oliveros, J. C., Prat, S., & Cubas, P. (2022). Spatial control of potato tuberization by the TCP transcription factor BRANCHED1b. Nature Plants, 8(3), 281–294. https://doi.org/10.1038/s41477-022-01112-2
Arteaga, N., Savic, M., Méndez-Vigo, B., Fuster-Pons, A., Torres-Pérez, R., Oliveros, J. C., Picó, F. X., & Alonso-Blanco, C. (2021). MYB transcription factors drive evolutionary innovations in Arabidopsis fruit trichome patterning. The Plant Cell, 33(3), 548–565. https://doi.org/10.1093/plcell/koaa041
Ramos‐Marquès, E., García‐Mendívil, L., Pérez‐Zabalza, M., Santander‐Badules, H., Srinivasan, S., Oliveros, J. C., Torres‐Pérez, R., Cebollada, A., Vallejo‐Gil, J. M., Fresneda‐Roldán, P. C., Fañanás‐Mastral, J., Vázquez‐Sancho, M., Matamala‐Adell, M., Sorribas‐Berjón, J. F., Bellido‑Morales, J. A., Mancebón‑Sierra, F. J., Vaca‑Núñez, A. S., Ballester‐Cuenca, C., Jiménez‐Navarro, M., … Pueyo, E. (2021). Chronological and biological aging of the human left ventricular myocardium: Analysis of microRNAs contribution. Aging Cell, 20(7). Portico. https://doi.org/10.1111/acel.13383
Tello, J., Torres-Pérez, R., Flutre, T., Grimplet, J., & Ibáñez, J. (2020). VviUCC1 Nucleotide Diversity, Linkage Disequilibrium and Association with Rachis Architecture Traits in Grapevine. Genes, 11(6), 598. https://doi.org/10.3390/genes11060598
Le Paslier, M.-C., Choisne, N., Bacilieri, R., Boursiquot, J.-M., Bras, M., Brunel, D., Chauveau, A., Hausmann, L., Lacombe, T., Laucou, V., Launay, A., Marchal, C., Martinez-Zapater, J.-M., Berard, A., Quesneville, H., Töpfer, R., Torres-Perez, R., & Adam-Blondon, A.-F. (2019). passport-data-sylv.txt [Data set]. Portail Data Inra. https://doi.org/10.15454/9RUCEP/YZGLTP
Le Paslier, M.-C., Choisne, N., Bacilieri, R., Boursiquot, J.-M., Bras, M., Brunel, D., Chauveau, A., Hausmann, L., Lacombe, T., Laucou, V., Launay, A., Marchal, C., Martinez-Zapater, J.-M., Berard, A., Quesneville, H., Töpfer, R., Torres-Perez, R., & Adam-Blondon, A.-F. (2019). genotypes_sylvestris.fam [Data set]. Portail Data Inra. https://doi.org/10.15454/9RUCEP/UDJM7M
Le Paslier, M.-C., Choisne, N., Bacilieri, R., Boursiquot, J.-M., Bras, M., Brunel, D., Chauveau, A., Hausmann, L., Lacombe, T., Laucou, V., Launay, A., Marchal, C., Martinez-Zapater, J.-M., Berard, A., Quesneville, H., Töpfer, R., Torres-Perez, R., & Adam-Blondon, A.-F. (2019). genotypes_SYLV_OUT.ped [Data set]. Portail Data Inra. https://doi.org/10.15454/9RUCEP/OIEAMO
Le Paslier, M.-C., Choisne, N., Bacilieri, R., Boursiquot, J.-M., Bras, M., Brunel, D., Chauveau, A., Hausmann, L., Lacombe, T., Laucou, V., Launay, A., Marchal, C., Martinez-Zapater, J.-M., Berard, A., Quesneville, H., Töpfer, R., Torres-Perez, R., & Adam-Blondon, A.-F. (2019). genotypes_SYLV_OUT.map [Data set]. Portail Data Inra. https://doi.org/10.15454/9RUCEP/5RACSC
Le Paslier, M.-C., Choisne, N., Bacilieri, R., Boursiquot, J.-M., Bras, M., Brunel, D., Chauveau, A., Hausmann, L., Lacombe, T., Laucou, V., Launay, A., Marchal, C., Martinez-Zapater, J.-M., Berard, A., Quesneville, H., Töpfer, R., Torres-Perez, R., & Adam-Blondon, A.-F. (2019). README.txt [Data set]. Portail Data Inra. https://doi.org/10.15454/9RUCEP/YR5YOD
Le Paslier, M.-C., Choisne, N., Bacilieri, R., Boursiquot, J.-M., Bras, M., Brunel, D., Chauveau, A., Hausmann, L., Lacombe, T., Laucou, V., Launay, A., Marchal, C., Martinez-Zapater, J.-M., Berard, A., Quesneville, H., Töpfer, R., Torres-Perez, R., & Adam-Blondon, A.-F. (2019). A dataset of 9.896 single nuclear polymorphisms for 112 wild grapes, obtained with the GrapeReSeq 18K Vitis chip [Data set]. Recherche Data Gouv. https://doi.org/10.15454/9RUCEP
Torres-Perez, R., Garcia-Martin, J. A., Montoliu, L., Oliveros, J. C., & Pazos, F. (2019). WeReview: CRISPR Tools—Live Repository of Computational Tools for Assisting CRISPR/Cas Experiments. Bioengineering, 6(3), 63. https://doi.org/10.3390/bioengineering6030063
Montero‐Conde, C., Graña‐Castro, O., Martín‐Serrano, G., Martínez‐Montes, Á. M., Zarzuela, E., Muñoz, J., Torres‐Perez, R., Pita, G., Cordero‐Barreal, A., Leandro‐García, L. J., Letón, R., López de Silanes, I., Guadalix, S., Pérez‐Barrios, A., Hawkins, F., Guerrero‐Álvarez, A., Álvarez‐Escolá, C., Regojo‐Zapata, R. M., Calsina, B., … Robledo, M. (2019). Hsa‐miR‐139‐5p is a prognostic thyroid cancer marker involved in HNRNPF‐mediated alternative splicing. International Journal of Cancer, 146(2), 521–530. Portico. https://doi.org/10.1002/ijc.32622
Remacha, L., Currás-Freixes, M., Torres-Ruiz, R., Schiavi, F., Torres-Pérez, R., Calsina, B., Letón, R., Comino-Méndez, I., Roldán-Romero, J. M., Montero-Conde, C., Santos, M., Pérez, L. I., Pita, G., Alonso, M. R., Honrado, E., Pedrinaci, S., Crespo-Facorro, B., Percesepe, A., Falcioni, M., … Cascón, A. (2018). Gain-of-function mutations in DNMT3A in patients with paraganglioma. Genetics in Medicine, 20(12), 1644–1651. https://doi.org/10.1038/s41436-018-0003-y
Royo, C., Torres-Pérez, R., Mauri, N., Diestro, N., Cabezas, J. A., Marchal, C., Lacombe, T., Ibáñez, J., Tornel, M., Carreño, J., Martínez-Zapater, J. M., & Carbonell-Bejerano, P. (2018). The Major Origin of Seedless Grapes Is Associated with a Missense Mutation in the MADS-Box Gene VviAGL11. Plant Physiology, 177(3), 1234–1253. https://doi.org/10.1104/pp.18.00259
Remacha, L., Comino-Méndez, I., Richter, S., Contreras, L., Currás-Freixes, M., Pita, G., Letón, R., Galarreta, A., Torres-Pérez, R., Honrado, E., Jiménez, S., Maestre, L., Moran, S., Esteller, M., Satrústegui, J., Eisenhofer, G., Robledo, M., & Cascón, A. (2017). Targeted Exome Sequencing of Krebs Cycle Genes Reveals Candidate Cancer–Predisposing Mutations in Pheochromocytomas and Paragangliomas. Clinical Cancer Research, 23(20), 6315–6324. https://doi.org/10.1158/1078-0432.ccr-16-2250
Gonzalez, R., Morales, P., Tronchoni, J., Cordero-Bueso, G., Vaudano, E., Quirós, M., Novo, M., Torres-Pérez, R., & Valero, E. (2016). New Genes Involved in Osmotic Stress Tolerance in Saccharomyces cerevisiae. Frontiers in Microbiology, 7. https://doi.org/10.3389/fmicb.2016.01545
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