Institution: CRAG
Research Groups: Bioinformatics Unit at CRAG
Position: Service manager
Home page: https://www.cragenomica.es/
Contact email: victo.gonzalez@cragenomics.es
BCB Committee: No committees assigned.
BCB Community: No communities assigned.
BCB Tools: No tools assigned.
BCB Services: Bioinformatics Unit at CRAG
Research topics: Model organisms, Non-model organisms, Plant genomics, Functional genomics, Sequence analysis, Pathway analysis, Data Visualization, Statistical Methods for Biology, DNA methylation, Genomics, Microbial communities, Transcriptomics, Bioinformatics education, Data Repositories, Analysis packages (R, Python, etc.), Annotation tools, Workflow managers
Publications
Martín-Cardoso, H., González-Miguel, V. M., Soler-López, L., Campo, S., & San Segundo, B. (2024). Association of Microbiome Diversity with Disease Symptoms in Brassica oleracea Leaves. Horticulturae, 10(7), 765. https://doi.org/10.3390/horticulturae10070765
Castanera, R., González-Miguel, V. M., Escolà, G., Olivé, M., Teixidó, N., Savé, R., Casacuberta, J. M., & San Segundo, B. (2024). Cultivar-Dependent Variations in the Microbiome of Grapevine Leaves. Horticulturae, 10(12), 1333. https://doi.org/10.3390/horticulturae10121333
Ros-Moner, E., Jimenez-Gongora, T., Villar-Martin, L., Vogrinec, L., Gonzalez-Miguel, V. M., kutnjak, D., & Rubio-Somoza, I. (2023). Conservation of molecular responses upon viral infection in the non-vascular plant Marchantia polymorpha. https://doi.org/10.1101/2023.11.06.565823
Escolà, G., González-Miguel, V. M., Campo, S., Catala-Forner, M., Domingo, C., Marqués, L., & San Segundo, B. (2023). Development and Genome-Wide Analysis of a Blast-Resistant japonica Rice Variety. Plants, 12(20), 3536. https://doi.org/10.3390/plants12203536
Salguero-Linares, J., Serrano, I., Ruiz-Solani, N., Salas-Gómez, M., Phukan, U. J., González, V. M., Bernardo-Faura, M., Valls, M., Rengel, D., & Coll, N. S. (2022). Robust transcriptional indicators of immune cell death revealed by spatiotemporal transcriptome analyses. Molecular Plant, 15(6), 1059–1075. https://doi.org/10.1016/j.molp.2022.04.010
González, V. M., Müller, S., Baulcombe, D., & Puigdomènech, P. (2015). Evolution of NBS-LRR Gene Copies among Dicot Plants and its Regulation by Members of the miR482/2118 Superfamily of miRNAs. Molecular Plant, 8(2), 329–331. https://doi.org/10.1016/j.molp.2014.11.013
González, V. M., Aventín, N., Centeno, E., & Puigdomènech, P. (2014). Interspecific and intraspecific gene variability in a 1-Mb region containing the highest density of NBS-LRR genes found in the melon genome. BMC Genomics, 15(1). https://doi.org/10.1186/1471-2164-15-1131
González, V. M., Aventín, N., Centeno, E., & Puigdomènech, P. (2013). High presence/absence gene variability in defense-related gene clusters of Cucumis melo. BMC Genomics, 14(1). https://doi.org/10.1186/1471-2164-14-782
Garcia-Mas, J., Benjak, A., Sanseverino, W., Bourgeois, M., Mir, G., González, V. M., Hénaff, E., Câmara, F., Cozzuto, L., Lowy, E., Alioto, T., Capella-Gutiérrez, S., Blanca, J., Cañizares, J., Ziarsolo, P., Gonzalez-Ibeas, D., Rodríguez-Moreno, L., Droege, M., Du, L., … Puigdomènech, P. (2012). The genome of melon ( Cucumis melo L.). Proceedings of the National Academy of Sciences, 109(29), 11872–11877. https://doi.org/10.1073/pnas.1205415109
Rodríguez-Moreno, L., González, V. M., Benjak, A., Martí, M. C., Puigdomènech, P., Aranda, M. A., & Garcia-Mas, J. (2011). Determination of the melon chloroplast and mitochondrial genome sequences reveals that the largest reported mitochondrial genome in plants contains a significant amount of DNA having a nuclear origin. BMC Genomics, 12(1). https://doi.org/10.1186/1471-2164-12-424
González, V. M., Garcia-Mas, J., Arús, P., & Puigdomènech, P. (2010). Generation of a BAC-based physical map of the melon genome. BMC Genomics, 11(1). https://doi.org/10.1186/1471-2164-11-339
González, V. M., Benjak, A., Hénaff, E. M., Mir, G., Casacuberta, J. M., Garcia-Mas, J., & Puigdomènech, P. (2010). Sequencing of 6.7 Mb of the melon genome using a BAC pooling strategy. BMC Plant Biology, 10(1). https://doi.org/10.1186/1471-2229-10-246
González, V. M., Rodríguez-Moreno, L., Centeno, E., Benjak, A., Garcia-Mas, J., Puigdomènech, P., & Aranda, M. A. (2010). Genome-wide BAC-end sequencing of Cucumis melo using two BAC libraries. BMC Genomics, 11(1). https://doi.org/10.1186/1471-2164-11-618
Ahumada, I., Cairó, A., Hemmerlin, A., González, V., Pateraki, I., Bach, T. J., Rodríguez-Concepción, M., Campos, N., & Boronat, A. (2008). Characterisation of the gene family encoding acetoacetyl-CoA thiolase in Arabidopsis. Functional Plant Biology, 35(11), 1100. https://doi.org/10.1071/fp08012
Deleu, W., González, V., Monfort, A., Bendahmane, A., Puigdomènech, P., Arús, P., & Garcia-Mas, J. (2007). Structure of two melon regions reveals high microsynteny with sequenced plant species. Molecular Genetics and Genomics, 278(6), 611–622. https://doi.org/10.1007/s00438-007-0277-2
Leivar, P., González, V. M., Castel, S., Trelease, R. N., López-Iglesias, C., Arró, M., Boronat, A., Campos, N., Ferrer, A., & Fernàndez-Busquets, X. (2005). Subcellular Localization of Arabidopsis 3-Hydroxy-3-Methylglutaryl-Coenzyme A Reductase. Plant Physiology, 137(1), 57–69. https://doi.org/10.1104/pp.104.050245
van Enckevort, L. J. G., Droc, G., Piffanelli, P., Greco, R., Gagneur, C., Weber, C., González, V. M., Cabot, P., Fornara, F., Berri, S., Miro, B., Lan, P., Rafel, M., Capell, T., Puigdomènech, P., Ouwerkerk, P. B. F., Meijer, A. H., Pe’, E., Colombo, L., … Pereira, A. (2005). EU-OSTID: A Collection of Transposon Insertional Mutants for Functional Genomics in Rice. Plant Molecular Biology, 59(1), 99–110. https://doi.org/10.1007/s11103-005-8532-6
Manzano, D., Fern�ndez-Busquets, X., Schaller, H., Gonz�lez, V., Boronat, A., Arr�, M., & Ferrer, A. (2004). The metabolic imbalance underlying lesion formation in Arabidopsis thaliana overexpressing farnesyl diphosphate synthase (isoform�1S) leads to oxidative stress and is triggered by the developmental decline of endogenous HMGR activity. Planta, 219(6), 982–992. https://doi.org/10.1007/s00425-004-1301-y
Rodríguez-Concepción, M., Forés, O., Martínez-García, J. F., González, V., Phillips, M. A., Ferrer, A., & Boronat, A. (2003). Distinct Light-Mediated Pathways Regulate the Biosynthesis and Exchange of Isoprenoid Precursors during Arabidopsis Seedling Development. The Plant Cell, 16(1), 144–156. https://doi.org/10.1105/tpc.016204
Kribii, R., Arró, M., Del Arco, A., González, V., Balcells, L., Delourme, D., Ferrer, A., Karst, F., & Boronat, A. (1997). Cloning and Characterization of the Arabidopsis Thaliana SQS1 Gene Encoding Squalene Synthase. European Journal of Biochemistry, 249(1), 61–69. Portico. https://doi.org/10.1111/j.1432-1033.1997.00061.x
@article{PMID:39774695, title = {Chronology of transcriptome and proteome expression during early Arabidopsis flower development.}, author = {Álvarez-Urdiola R and Matus JT and González-Miguel VM and Bernardo-Faura M and Riechmann JL}, doi = {10.1093/jxb/eraf005}, journal = {Journal of experimental botany}, month = {01}, year = {2025} }
Research lines:
There are no lines of investigation associated with this user.
Funding:
No funded projects.
