Systems Biotechnology Group
Institution: Centro Nacional de Biotecnología (CNB)
Members (researchers): Juan Nogales Enrique
Home page: https://www.cnb.csic.es/investigacion/departamentos/biologia-sistemas/systems-biotechnology-group/
Contact email: jnogales@cnb.csic.es
Tools: FLYCOP, Golden Standard
Service Units: CNBio (CNB DNA Biofoundry)
Research topics:
Amplicon Sequencing, Analysis packages (R, Python, etc.), Biological interpretation, Biosystems Modeling, Deep Learning in Biology, Integrative Analysis, Large language models, Machine Learning in Biology, Metabolic modelling, Metagenomics, Metatranscriptomics, Microbial Communities, Microbial communities, Model organisms, Network Biology, Non-model organisms, Pathway analysis, Pathway analysis, Population genomics, RNA Sequencing (RNA-seq), Single-cell (scRNA-seq), Single-cell omics
Publications
There are no publications associated with this research group.
Research lines
- Increasing the completeness and scope of metabolic reconstructions
- Understanding and exploiting the multioptimality of microbial metabolism
- System level analysis and designing microbial communities
- Developing a DNA biofoundry towards the AI-guided exploration of microbial chemical space.
Funding
- FLAVO-GREEN. CSIC, LINCG25043. International. 01/07/2025–31/12/2027.
- PROMISEANG. Horizon Europe, GA nº 101112378,. EU. 01/09/2023–31/08/2027.
- DeCYPher. Horizon Europe, GA nº 101081782. EU. 01/09/2023–01/08/2027.
- AMBIZIONE. CNB, CEX2023-001386-S. National. 01/06/2025–31/05/2029.
- SAAMBA. MCIU/AEI/FEDER, CPP2023-010641. Industrial. 01/10/2024–01/09/2027.
- Rob3D. MCI, PID2022-139247OB-I00. National. 01/09/2023–30/08/2026.
- ZiRO. CSIC-REPSOL. Industrial. 01/04/2025-31/03/2026.