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Institution: CBM
Research Groups: Proteomics Service at CBM
Position: Postdoc
Contact email: alberto.rodriguez@cbm.csic.es
BCB Committee: Expertise mapping, Support BCB Excellence
BCB Community: No communities assigned.
BCB Tools: No tools assigned.
BCB Services:
Research topics: Microbial Communities, Model organisms, Non-model organisms, Plant genomics, Gene regulatory networks, Functional genomics, Function prediction, Functional annotation, Pathway analysis, Molecular evolution, Conservation Analysis, Evolutionary rates, Phylogenetic Analysis, Sequence analysis, Mapping, Sequence Alignment, Sequence error correction, Systems Biology, Integrative Analysis, Network Biology, Pathway analysis, Regulatory biology, Deep Learning in Biology, Machine Learning in Biology, Data Visualization, DNA methylation, Genome Assembly, Genome Sequencing, Genomic Annotation, Population genomics, Variant calling, Biological interpretation, Metabolite annotation, Metabolite Biomarker Identification, Metabolome profiling, Metagenomics, Proteing-Protein Interactions, Structural genomics, Expression Profiling, RNA Sequencing (RNA-seq), Benchmarking, Bioinformatics education, Standards in Computational Biology, Biological Databases, Biological Ontologies, Data Repositories, Analysis packages (R, Python, etc.), Annotation tools, Desktop application, Web-service, Workflow managers, High-performance Computing, Parallel Computing
Biography: As a computational biologist, I stand at the forefront of cutting-edge research, leveraging my comprehensive skills in both biology and programming to drive innovation. Over the course of my career, I have successfully steered the development of several impactful research projects, showcasing my ability to seamlessly integrate biological insights with advanced computational methodologies.
My proficiency extends beyond the realm of scientific discovery; I bring a strong foundation in project management, ensuring not only the technical success of initiatives but also their efficient and organized execution. This dual skill set allows me to navigate the complexities of interdisciplinary projects with finesse.
Having cultivated my expertise in diverse scientific landscapes, including experiences in France and the USA, I have gained a global perspective that enhances my adaptability and collaborative capabilities. Fluent in both English and French, I facilitate clear and effective communication in multicultural settings, reinforcing my commitment to international collaboration.
Currently on the verge of completing my Ph.D. in computational biology, I am poised to contribute significantly to the field. This academic pursuit underscores my dedication to advancing knowledge and underscores my commitment to staying at the forefront of computational biology research. With an excellent command of both English and French, I am well-equipped to engage with the global scientific community and contribute to the dynamic intersection of biology and technology.
Publications
Rodriguez-Izquierdo, A., Carrasco, D., Anand, L., Magnani, R., Catarecha, P., Arroyo-Garcia, R., & Rodriguez Lopez, C. M. (2024). Epigenetic differences between wild and cultivated grapevines highlight the contribution of DNA methylation during crop domestication. BMC Plant Biology, 24(1). https://doi.org/10.1186/s12870-024-05197-z
Rodriguez-Izquierdo, A., Carrasco, D., Valledor, L., Bota, J., López-Hidalgo, C., Revilla, M. A., & Arroyo-Garcia, R. (2024). The scion-driven transcriptomic changes guide the resilience of grafted near-isohydric grapevines under water deficit. Horticulture Research, 12(2). https://doi.org/10.1093/hr/uhae291
Dong, Y., Duan, S., Xia, Q., Liang, Z., Dong, X., Margaryan, K., Musayev, M., Goryslavets, S., Zdunić, G., Bert, P.-F., Lacombe, T., Maul, E., Nick, P., Bitskinashvili, K., Bisztray, G. D., Drori, E., De Lorenzis, G., Cunha, J., Popescu, C. F., … Chen, W. (2023). Dual domestications and origin of traits in grapevine evolution. Science, 379(6635), 892–901. https://doi.org/10.1126/science.add8655
:none. (2022). XIII. International Symposium on Grapevine Breeding and Genetics, Pioneering Wines (PIWIs) - Innovation and Tradition, Abstract Book: 10th - 15th July 2022, Institute for Grapevine Breeding Geilweilerhof I Siebeldingen/Germany. Julius-Kühn-Archiv, vol. 470. https://doi.org/10.5073/20220612-152952
Carrasco, D., Zhou-Tsang, A., Rodriguez-Izquierdo, A., Ocete, R., Revilla, M. A., & Arroyo-García, R. (2022). Coastal Wild Grapevine Accession (Vitis vinifera L. ssp. sylvestris) Shows Distinct Late and Early Transcriptome Changes under Salt Stress in Comparison to Commercial Rootstock Richter 110. Plants, 11(20), 2688. https://doi.org/10.3390/plants11202688
Cordella, C. B. Y., Izquierdo-Rodriguez, A., & Durand-Thouand, M.-J. (2019). A 3D-Fluorescence Fingerprinting Approach to Detect Physiological Modifications Induced by Pesticide Poisoning in Apis mellifera: A Preliminary Study. Journal of Fluorescence, 29(6), 1475–1485. https://doi.org/10.1007/s10895-019-02461-6
Rodríguez Izquierdo, A. (n.d.). Understanding the Genetic Basis of Grapevine Diversity: Implications for Vineyard Resilience in the Face of Climate Change. https://doi.org/10.20868/upm.thesis.83336
Research lines:
There are no lines of investigation associated with this user.
Funding:
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HPC Resources: HPC Drago
Participation in:
Master Programs: Master in Computational Biology - UPM Master in Food Safety (SALINA) - UPM
National Research Networks: BCB
International Research Networks: COST ACTION 17111 - Integrape & Grapedia