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Effect of Photosystem II inhibitor K-15 on photochemical reactions of the isolated D1/D2 cytochrome b559 complex

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pH sensitivity of the redox state of cytochrome b559 may regulate its function as a protectant against donor and acceptor side photoinhibition

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Comparison of primary charge separation in the photosystem II reaction center complex isolated from wild-type and D1-130 mutants of the cyanobacterium Synechocystis PCC 6803

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Structure and thermal stability of photosystem II reaction centers studied by infrared spectroscopy

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Structural predictions on the 33 kDa extrinsic protein associated to the oxygen evolving complex of photosynthetic organisms

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Structural and functional properties of Escherichia coli-derived nucleoplasmin: A comparative study of recombinant and natural proteins

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Expression of cysteine proteinase mRNA in chickpea (Cicer arietinum L.) is localized to provascular cells in the developing root

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Water oxidation chemistry of photosystem II

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Evidence for Cu(I)-thiolate ligation and prediction of a putative copper-binding site in the Escherichia coli NADH dehydrogenase-2

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Comparative analysis of chloroplast genomes: Functional annotation, genome-based phylogeny, and deduced evolutionary patterns

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Three-dimensional electron cryo-microscopy study of the extrinsic domains of the oxygen-evolving complex of spinach. Assignment of the PsbO protein

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The single tryptophan of the PsbQ protein of photosystem II is at the end of a 4-α-helical bundle domain

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Structural analysis of the PsbQ protein of photosystem II by fourier transform infrared and circular dichroic spectroscopy and by bioinformatic methods

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Fluorescence induction of Photosystem II membranes shows the steps till reduction and protonation of the quinone pool

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Calcium-dependent conformational change and thermal stability of the isolated PsbO protein detected by FTIR spectroscopy

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Structural stability of the PsbQ protein of higher plant photosystem II

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Single mutations of residues outside the active center of the xylanase Xys1Δ from Streptomyces halstedii JM8 affect its activity

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Interactome data and databases: Different types of protein interaction

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Evolution of oxygenic photosynthesis: Genome-wide analysis of the OEC extrinsic proteins

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Analysis of the structure of the PsbO protein and its implications

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The 1.49 Å resolution crystal structure of PsbQ from photosystem II of Spinacia oleracea reveals a PPII structure in the N-terminal region

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Structure and evolution of the extrinsic proteins that stabilize the oxygen-evolving engine

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Mobilisation with G-CSF in healthy donors promotes a high but temporal deregulation of genes [7]

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Proteomic profiles of thylakoid membranes and changes in response to iron deficiency

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Algorithm to find gene expression profiles of deregulation and identify families of disease-altered genes

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APID: Agile protein interaction DataAnalyzer

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Transcriptional networks of knockout cell lines identify functional specificities of H-Ras and N-Ras: Significant involvement of N-Ras in biotic and defense responses

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The 90S preribosome is a multimodular structure that is assembled through a hierarchical mechanism

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Oxygen-evolving extrinsic proteins (PsbO,P,Q,R): Bioinformatic and functional analysis

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Methylseleninic acid enhances the effect of etoposide to inhibit prostate cancer growth in vivo

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Linear array of conserved sequence motifs to discriminate protein subfamilies: Study on pyridine nucleotide-disulfide reductases

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Laser microdissection and microarray analysis of the hippocampus of Ras-GRF1 knockout mice reveals gene expression changes affecting signal transduction pathways related to memory and learning

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Gene expression profiling of B lymphocytes and plasma cells from Waldenström's macroglobulinemia: Comparison with expression patterns of the same cell counterparts from chronic lymphocytic leukemia, multiple myeloma and normal individuals

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Ensemble of support vector machines to improve the cancer class prediction based on the gene expression profiles

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Ensemble of kernel based classifiers to improve the human cancer prediction using DNA microarrays

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Combining dissimilarity based classifiers for cancer prediction using gene expression profiles

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APID2NET: Unified interactome graphic analyzer

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Role of electrostatics on membrane binding, aggregation and destabilization induced by NAD(P)H dehydrogenases. Implication in membrane fusion

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Interleukin-12 inhibits liver-specific drug-inducible systems in vivo

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Human gene coexpression landscape: Confident network derived from tissue transcriptomic profiles

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Dynamic flexibility in the structure and function of photosystem II in higher plant thylakoid membranes: The grana enigma

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Combining dissimilarities in a Hyper Reproducing Kernel Hilbert Space for complex human cancer prediction

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Classification of multiple cancer types in a hyper reproducing kernel hilbert space

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A novel lung cancer signature mediates metastatic bone colonization by a dual mechanism

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Serum-dependent transcriptional networks identify distinct functional roles for H-Ras and N-Ras during initial stages of the cell cycle

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RasGRF1 disruption causes retinal photoreception defects and associated transcriptomic alterations

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Profiling of chemonaive osteosarcoma and paired-normal cells identifies EBF2 as a mediator of osteoprotegerin inhibition to tumor necrosis factor-related apoptosis-inducing ligand-induced apoptosis

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Kernel alignment k-NN for human cancer classification using the gene expression profiles

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Improving k-NN for human cancer classification using the gene expression profiles

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Structural domain-domain interactions: Assessment and comparison with protein-protein interaction data to improve the interactome

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Protein-protein interactions essentials: key concepts to building and analyzing interactome networks.

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Mapping of genetic abnormalities of primary tumours from metastatic CRC by high-resolution SNP arrays

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GATExplorer: Genomic and Transcriptomic Explorer; mapping expression probes to gene loci, transcripts, exons and ncRNAs

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Deregulation of microRNA expression in the different genetic subtypes of multiple myeloma and correlation with gene expression profiling

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Bioinformatics training: A review of challenges, actions and support requirements

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Transcriptional repression of the tumor suppressor DRO1 by AIB1

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Ten simple rules for developing a short bioinformatics training course

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Segmentation of genomic and transcriptomic microarrays data reveals major correlation between DNA copy number aberrations and gene-loci expression

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PSICQUIC and PSISCORE: Accessing and scoring molecular interactions

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Functional integrative levels in the human interactome recapitulate organ organization

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Functional analysis beyond enrichment: Non-redundant reciprocal linkage of genes and biological terms

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Cortactin (CTTN) overexpression in osteosarcoma correlates with advanced stage and reduced survival

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Unique genetic profile of sporadic colorectal cancer liver metastasis versus primary tumors as defined by high-density single-nucleotide polymorphism arrays

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Receptor of activated protein C promotes metastasis and correlates with clinical outcome in lung adenocarcinoma

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Protein-protein interaction networks: Unraveling the wiring of molecular machines within the cel

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Protein interactions: Mapping interactome networks to support drug target discovery and selection

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Prognostic impact of del(17p) and del(22q) as assessed by interphase FISH in sporadic colorectal carcinomas

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Molecular Characterization of Chronic Lymphocytic Leukemia Patients with a High Number of Losses in 13q14

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Integrating literature-constrained and data-driven inference of signalling networks

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Impaired expression of DICER, DROSHA, SBDS and some microRNAs in mesenchymal stromal cells from myelodysplastic syndrome patients

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Identification of a novel recurrent gain on 20q13 in chronic lymphocytic leukemia by array CGH and gene expression profiling

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Bioinformatics training network (BTN): A community resource for bioinformatics trainers

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A novel molecular mechanism involved in multiple myeloma development revealed by targeting MafB to haematopoietic progenitors

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Transcriptome analysis in prenatal IGF1-deficient mice identifies molecular pathways and target genes involved in distal lung differentiation

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IAnn: An event sharing platform for the life sciences

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Genome-wide profiling of methylation identifies novel targets with aberrant hypermethylation and reduced expression in low-risk myelodysplastic syndromes

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Best practices in bioinformatics training for life scientists

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A gene signature of bone metastatic colonization sensitizes for tumor-induced osteolysis and predicts survival in lung cancer

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Transcriptomic profile induced in bone marrow mesenchymal stromal cells after interaction with multiple myeloma cells: Implications in myeloma progression and myeloma bone disease

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TET2 overexpression in chronic lymphocytic leukemia is unrelated to the presence of TET2 variations

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RHOB influences lung adenocarcinoma metastasis and resistance in a host-sensitive manner

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MiRNA cargo within exosome-like vesicle transfer influences metastatic bone colonization

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Identification of a characteristic copy number alteration profile by high-resolution single nucleotide polymorphism arrays associated with metastatic sporadic colorectal cancer

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Gene Expression Analysis and Profiling of Microarrays Data and RNA-Sequencing Data

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ColoLipidGene: Signature of lipid metabolism-related genes to predict prognosis in stage-II colon cancer patients

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Analysis of cellular proliferation and survival signaling by using two ligand/receptor systems modeled by pathway logic

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Analyse multiple disease subtypes and build associated gene networks using genome-wide expression profiles

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Cystatin D locates in the nucleus at sites of active transcription and modulates gene and protein expression

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Infection exposure is a causal factor in B-cell precursor acute lymphoblastic leukemia as a result of Pax5-inherited susceptibility

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Role of nerve growth factor signaling in cancer cell proliferation and survival using a reachability analysis approach

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Path2enet: Generation of human pathway-derived networks in an expression specific context

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Insights into the human mesenchymal stromal/stem cell identity through integrative transcriptomic profiling

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Identification of expression patterns in the progression of disease stages by integration of transcriptomic data

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Evolutionary hallmarks of the human proteome: Chasing the age and coregulation of protein-coding genes

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Mesenchymal stromal cells (MSC) from JAK2+myeloproliferative neoplasms differ from normal MSC and contribute to the maintenance of neoplastic hematopoiesis

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Infection exposure promotes ETV6-RUNX1 precursor B-cell leukemia via impaired H3K4 demethylases

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Epidermal Growth Factor Signaling towards Proliferation: Modeling and Logic Inference Using Forward and Backward Search

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Screening and Validation of Novel Biomarkers in Osteoarticular Pathologies by Comprehensive Combination of Protein Array Technologies

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Corrigendum: Bioinformatics in Latin America and SoIBio impact, a tale of spin-off and expansion around genomes and protein structures [Briefings in Bioinformatics, (2017)] doi: 10.1093/bib/bbx064

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Lmo2 expression defines tumor cell identity during T-cell leukemogenesis

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Computational Biology and Bioinformatics (BCB)

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