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Sinorhizobium fredii HH103 RirA Is Required for Oxidative Stress Resistance and Efficient Symbiosis with Soybean

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Sinorhizobium fredii HH103 nolR and nodD2 mutants gain capacity for infection thread invasion of Lotus japonicus Gifu and Lotus burttii

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Sinorhizobium fredii HH103 syrM inactivation affects the expression of a large number of genes, impairs nodulation with soybean and extends the host-range to Lotus japonicus

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The nodD1 gene of Sinorhizobium fredii HH103 Restores Nodulation Capacity on Bean in a Rhizobium tropici CIAT 899 nodD1/nodD2 Mutant, but the Secondary Symbiotic Regulators nolR, nodD2 or syrM Prevent HH103 to Nodulate with This Legume

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Surface Motility Regulation of Sinorhizobium fredii HH103 by Plant Flavonoids and the NodD1, TtsI, NolR, and MucR1 Symbiotic Bacterial Regulators

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A complex regulatory network governs the expression of symbiotic genes in Sinorhizobium fredii HH103

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Methods for Studying Swimming and Surface Motilities in Rhizobia

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Sinorhizobium fredii HH103 flgJ is a flagellar gene induced by genistein in a NodD1- and TtsI- dependent manner

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TtsI: Beyond Type III Secretion System Activation in Rhizobia

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Genetic and species rearrangements in microbial consortia impact biodegradation potential

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Autoactive CNGC15 enhances root endosymbiosis in legume and wheat

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Noise-induced spatial patterns

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The stochastic stabilized Kuramoto-Sivashinsky equation: A model for compact electrodeposition growth

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Small scale properties of the stochastic stabilized Kuramoto-Sivashinsky equation

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Negative resistance and anomalous hysteresis in a collective molecular motor

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Finite resolution effects in the analysis of the scaling behavior of rough surfaces

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Switching-induced Turing instability

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Stationary and oscillatory spatial patterns induced by global periodic switching

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Pattern formation induced by nonequilibrium global alternation of dynamics

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Erratum: Pattern formation induced by nonequilibrium global alternation of dynamics (Physical Review E (2002) 66 (036216))

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Spatial patterns induced purely by dichotomous disorder

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Patterns in reaction-diffusion systems generated by global alternation of dynamics

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Noise-driven mechanism for pattern formation

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Dynamics of two granules

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Dynamical scaling analysis of plant callus growth

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Ratchets in homogeneous extended systems: Internal modes and the role of noise

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Phase transitions in relaxational systems with field-dependent coefficients

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Outbreaks of Hantavirus induced by seasonality

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Habitat size and extinction in population dynamics

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Extinction in population dynamics

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Effects of seasonality and of internal fluctuations on the spreading of Hantavirus

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Effects of internal fluctuations on the spreading of Hantavirus

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Comprehensive study of phase transitions in relaxational systems with field-dependent coefficients

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Nonequilibrium patterns and shape fluctuations in reactive membranes

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Nodal cilia dynamics and the specification of the left/right axis in early vertebrate embryo development

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Generation of dynamic structures in nonequilibrium reactive bilayers

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Erratum: Nonequilibrium patterns and shape fluctuations in reactive membranes (Physical Review E (2005) 71 (051906))

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Comments on the article "The Universal Dynamics of Tumor Growth" A. Brú et al

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Noise-induced oscillatory behavior in field-dependent relaxational dynamics

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Comprehensive study of pattern formation in relaxational systems

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Robustness and stability of the gene regulatory network involved in DV boundary formation in the Drosophila wing

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Phase separation in three-component lipid membranes: From Monte Carlo simulations to Ginzburg-Landau equations

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A spatial toggle switch drives boundary formation in development

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Noise-induced coherence in multicellular circadian clocks

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Pattern formation in nonequilibrium lipid membranes: From membrane undulations to lipid rafts

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Interplay between intrinsic noise and the stochasticity of the cell cycle in bacterial colonies

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Direct mapping of nanoscale compositional connectivity on intact cell membranes

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Noise regulation by quorum sensing in low mRNA copy number systems

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Dynamics and mechanical stability of the developing dorsoventral organizer of the wing imaginal disc

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Stochastic stabilization of phenotypic States: the genetic bistable switch as a case study.

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Interplay of cytoskeletal activity and lipid phase stability in dynamic protein recruitment and clustering

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Dynamics of the quorum sensing switch: Stochastic and non-stationary effects

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Sonic hedgehog signaling switches the mode of division in the developing nervous system

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The cellular Ising model: A framework for phase transitions in multicellular environments

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Modeling the Ebola zoonotic dynamics: Interplay between enviroclimatic factors and bat ecology

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Finite cell-size effects on protein variability in Turing patterned tissues

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Erratum to: Scutoids are a geometrical solution to three-dimensional packing of epithelia (Nature Communications, (2018), 9, 1, (2960), 10.1038/s41467-018-05376-1)

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Differentiation of live and heat-killed E. coli by microwave impedance spectroscopy

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A Predictive Spatial Distribution Framework for Filovirus-Infected Bats

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A Markovian Approach towards Bacterial Size Control and Homeostasis in Anomalous Growth Processes

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Scutoids are a geometrical solution to three-dimensional packing of epithelia

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A non-linear analysis of Turing pattern formation

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Self-sustained Planar Intercalations due to Mechanosignaling Feedbacks Lead to Robust Axis Extension during Morphogenesis

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TiFoSi: an efficient tool for mechanobiology simulations of epithelia

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The complex three-dimensional organization of epithelial tissues

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Mechanics and self-organization in tissue development

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Bacterial degrons in synthetic circuits

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Estimation of Ebola’s spillover infection exposure in Sierra Leone based on sociodemographic and economic factors

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ANISE: an application to design mechanobiology simulations of planar epithelia

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Comprehensive profiling of polyclonal sera targeting a non-enveloped viral capsid

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Developmental Pattern Formation: Spanish Contributions from a Biophysical Perspective

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Random field calibration with data on irregular grid for regional analyses: A case study on the bare carrying capacity of bats in Africa

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Stochastic analysis of Ebola infection in small zoonotic niches

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Apico-basal intercalations enable the integrity of curved epithelia

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Mechanical strain modulates Min patterning and division inE. colifilaments

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Spatial Dynamics and Emergent Properties of pLS20 Conjugation on Solid Surfaces

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Physical communication pathways in bacteria: an extra layer to quorum sensing

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VIPERA

A Snakemake workflow for SARS-CoV-2 Viral Intra-Patient Evolution Reporting and Analysis. Viral mutations within patients...

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Computational Biology Unit at EEZ

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Analysis of rhizobial endosymbionts of Vicia, Lathyrus and Trifolium species used to maintain mountain firewalls in Sierra Nevada National Park (South Spain)

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Whole-genome sequences of two Arthrobacter strains isolated from a holm oak rhizosphere affected by wildfire

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Metabarcoding reveals that rhizospheric microbiota of Quercus pyrenaica is composed by a relatively small number of bacterial taxa highly abundant

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Bacteria from the endosphere and rhizosphere of Quercus spp. Use mainly cell wall-associated enzymes to decompose organic matter

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Comparative study of neighboring Holm oak and olive trees-belowground microbial communities subjected to different soil management

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Involvement of the metabolically active bacteria in the organic matter degradation during olive mill waste composting

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Bacteriome dataset from the rhizosphere of trees in a Pinus pinaster and Pinus halepensis dominated forest subjected to drought conditions

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Bacterial inoculation of Quercus pyrenaica trees alters co‐occurrence patterns but not the composition of the rhizosphere bacteriome in wild conditions

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Changes in rice rhizosphere and bulk soil bacterial communities in the Doñana wetlands at different growth stages

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Pitting the olive seed microbiome

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Mediterranean pine forest decline: A matter of root-associated microbiota and climate change

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Unraveling the shifts in the belowground microbiota and metabolome of Pinus pinaster trees affected by forest decline

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Persistent SARS-CoV-2 infection with repeated clinical recurrence in a patient with common variable immunodeficiency

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The structural role of SARS-CoV-2 genetic background in the emergence and success of spike mutations: The case of the spike A222V mutation

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get_MNV

get_MNV is a tool designed to identify Multi-Nucleotide Variants (MNVs) within the same codon in...

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SNPick is a fast and memory-efficient tool designed to extract SNP (Single Nucleotide Polymorphism) sites...

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tappAS: a comprehensive computational framework for the analysis of the functional impact of differential splicing

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SQANTI3: curation of long-read transcriptomes for accurate identification of known and novel isoforms

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Delineating biological and technical variance in single cell expression data

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scFeatureFilter: Correlation-Based Feature Filtering for Single-Cell RNAseq