Olive Atlas
OliveAtlas aims to provide interactive bioinformatics tools to explore gene expression data of olive tree. The current version of OliveAtlas includes data for most of the main organs of the olive tree variety Picual (leaves, flower, pollen, fruits, seeds, roots, stem, and meristem), and multiple responses to biotic and abiotic stresses such as cold, wound and infection of Verticillium dahliaea.
Info
Members (researchers): Amanda Bullones Pendón
Research Groups: Breeding and developmental biology of subtropical fruit
Contact Email: claros@uma.es
Tool Repository: https://www.oliveatlas.uma.es/
Documentation: https://www.oliveatlas.uma.es/easy_gdb/help/00_help.php
Publications DOI: doi:10.3390/plants12061274
Applications of Computational Biology, Data Analysis, Data Visualization, Expression Profiling, Plant genomics, RNA Sequencing (RNA-seq), Transcriptomics
Technical details
Type of application
- Web database with precompiled analyses
Software compatibility
- Linux
- Mac
- Windows
Hardware requirements
- Web browser
Programming language
- BASH
- JavaScript
- PHP
- R
Type of containerization
- None
Wrapper type
- None
Input file formats
Output file formats
- csv
- fasta
- html
- tsv