RSAT Plants
A plant-dedicated server for the analysis of regulatory sequences
Info
No researchers found.
Research Groups: Computational and structural biology @EEAD-CSIC
Contact Email: compbio@eead.csic.es
Tool Repository: https://rsat.eead.csic.es/plants
Documentation: https://github.com/rsa-tools
Publications DOI: 10.1093/nar/gkac312
3D chromatin structure, Analysis packages (R, Python, etc.), Annotation tools, Applications of Computational Biology, Bioinformatics education, Bioinformatics enabling techniques, Bioinformatics Infrastructure, Bioinformatics Software and Tools, Computational models and simulations, Computational Techniques, Conservation Analysis, Containers Computing, Data Analysis, Data Repositories, Data Visualization, DNA methylation, Epigenomics, Expression Profiling, FAIRfication, Frequentist analysis, Gene regulatory networks, Genomic Annotation, Genomics, Integrative Analysis, Molecular evolution, Pathway analysis, Regulatory biology, Standards in Computational Biology, Statistical Methods for Biology, Systems Biology, Transcriptomics, Variant calling, Web-service
Technical details
Type of application
- Docker container
- Web-service
Software compatibility
- Linux
- Mac
- Windows
Hardware requirements
Programming language
- BASH
- C
- Perl
- PHP
- Python
- R
Type of containerization
- Docker
Wrapper type
- None
Input file formats
- bed
- csv
- fasta
- gff
- gtf
- Other
- tsv